Table 1

Taxonomic distribution of RedCAP sequences in red algae with primary plastids and algae with secondary plastids of red algal origin
Classification (class, species) Database [references] Gene model
Cryptophyceae
Guillardia theta JGI [65,66] Guith1:186670
Coccolithophyceae
Emiliania huxleyi JGI [68] Emihu1:310333
Isochrysis galbana GenBank EST [70] gi106825476
Pavlovophyceae
Diacronema lutheri GenBank EST [70] gi106858477
Phaeophyceae
Ectocarpus siliculosus GenBank EST [21,70] gi242173528
OrcAE [22,23] Esi0256_0036
Bacillariophyceae
Fragilariopsis cylindrus JGI [68] Fracy1:210193
Phaeodactylum tricornutum JGI [61,62] Phatr2:17326
Coscinodiscophyceaes
Thalassiosira pseudonana JGI [63,64] Thaps3:270215
Dictyochophyceae
Pseudochattonella farcimen GenBank EST [24,70] gi319967268
Pelagophyceae
Aureococcus anophagefferens JGI [25,68] Auran1:25646
Florideophyceae
Furcellaria lumbricalis GenBank EST [26,70] gi294363890
Gracilaria changii GenBank EST [70] gi120457728
Gracilaria tenuistipitata GenBank EST [70] gi327362708
Griffithsia japonica UniProt [75] Q7XZ09
Griffithsia okiensis GenBank EST [27,70] gi224829379
Cyanidiophyceae
Galdieria sulphuraria Michigan State University contig 9803
Galdieria database[72-74]
Bangiophyceae
Pyropia yezoensis GenBank EST [28,70] gi8590586
Porphyridiophyceae
Porphyridium purpureum GenBank EST [29,70] gi317790494

Sturm et al.

Sturm et al. BMC Evolutionary Biology 2013 13:159   doi:10.1186/1471-2148-13-159

Open Data