Phylogenetic relationships of RedCAPs. Thirteen available full-length sequences from red algae and algae with secondary plastids of red algal origin, with an aligned 146 amino acid positions, thereof 99 phylogenetically informative, were analysed. A Maximum likelihood tree was inferred under the CpRev + G model. Bootstrap values for Neighbor-joining (10,000 replicates) and Maximum likelihood analysis (100 replicates) as well as posterior probabilities (one million generation, 25% burn-in) are given. Accession numbers of analysed sequences are listed in Table S1, see Additional file 1, for sequence alignment see Additional file 6.
Sturm et al. BMC Evolutionary Biology 2013 13:159 doi:10.1186/1471-2148-13-159