Table 1

87 taxa included in this study
Clade Species Acc. # Tissue # Voucher Museum # Study
Esociformes Esox lucius AP004103 Ishiguro et al. 2003 [43]
Dallia pectoralis AP004102 Ishiguro et al. 2003 [43]
Salmoniformes Coregonus lavaretus AB034824 Miya & Nishida 2000 [44]
Thymallus thymallus FJ853655 Yasuike et al. 2010
Salvelinus alpinus AF154851 Doiron et al. 2002
Argentiniformes Bathylagus ochotensis AP004101 Ishiguro et al. 2003 [43]
Nansenia ardesiaca AP004106 Ishiguro et al. 2003 [43]
Glossanodon semifasciatus AP004105 Ishiguro et al. 2003 [43]
Opistophroctus soleatus AP004110 Ishiguro et al. 2003 [43]
Osmeriformes Retropinna retropinna AP004108 Ishiguro et al. 2003 [43]
Salangichthys microdon AP004109 Ishiguro et al. 2003 [43]
Mallotus villosus HM106491 Li et al. 2010
Plecoglossus altivelis AB047553 Ishiguro et al. 2001
Stomiiformes Diplophos taenia AB034825 Miya & Nishida 2000 [44]
Chauliodus sloani AP002915 Miya et al. 2001 [33]
Gonostoma gracile AB016274 Miya & Nishida 1999 [45]
Galaxiiformes Galaxiella nigrostriata AP006853 Miya et al. (unpubl.)
Galaxias maculates AP004104 Ishiguro et al. 2003 [43]
Galaxias gollumoides HM106487 Li et al. 2010
Aulopiformes Synodus variegatus AY524977 Chen & Wu (unpubl.)
Chlorophthalmus agassizi AP002918 Miya et al. 2001 [33]
Aulopus japonicus AB047821 Kawaguchi et al. 2001 [33]
Harpadon microchir AP002919 Miya et al. 2001 [33]
Saurida undosquamis AP002920 Miya et al. 2001 [33]
Ateleopodiformes Ateleopus japonicus AP002916 Miya et al. 2001 [33]
Ijimaia dofleini AP002917 Miya et al. 2001 [33]
Lampriformes Lampris guttatus AP002924 Miya et al. 2001 [33]
Zu cristatus AP002926 Miya et al. 2001 [33]
Trachipterus trachypterus AP002925 Miya et al. 2001 [33]
Myctophiformes Neoscopelus macrolepidotus AP012238 KU 3297 Uncatalogued This study
Neoscopelus microchir AP002921 Miya et al. 2001 [33]
Scopelengys tristis AP012228 NSMT-P 99997 NSMT-P 99997 This study
Solivomer arenidens AP012249 NSMT Uncatalogued This study
Benthosema fibulatum AP012253 NSMT-P 75816 NSMT-P 75816 This study
Benthosema glaciale AP012264 ZMUC #8160 ZMUC P2393965 This study
Benthosema pterotum AP012260 NSMT-P 75855 NSMT-P 75855 This study
Bolinichthys distofax AP012232 NSMT-P 97624 NSMT-P 97624 This study
Bolinichthys pyrsobolus AP012261 NSMT-P 92273 NSMT-P 92273 This study
Centrobranchus choerocephalus AP012237 NSMT-P 102902 NSMT-P 102902 This study
Ceratoscopelus maderensis AP012259 ZMUC #6600 ZMUC P2393929 This study
Diaphus chrysorhynchus AP012230 NSMT-P 79902 NSMT-P 79902 This study
Diaphus gigas AP012235 NSMT-P 91530 NSMT-P 91530 This study
Diaphus luetkeni AP012231 ASIZP 911514 ASIZP66276 This study
Diaphus splendidus AP002923 Miya et al. 2001 [33]
Diaphus theta AP012240 KU 2135 KU 27971 This study
Diogenichthys atlanticus AP012233 SIO 09320 SIO 09320 This study
Electrona antarctica AP012248 ZMUC #7552 ZMUC P2393962 This study
Gymnoscopelus nicholsi AP012250 ZMUC #7806 ZMUC P2393963 This study
Krefftichthys anderssoni AP012236 ZMUC #7550 ZMUC P2393964 This study
Lampadena anomala AP012227 ME 4201#3 ZMUB 18019 This study
Lampadena urophaos atlantica AP012251 ME 7371#4 ZMUB 18050 This study
Lampadena yaquinae AP012257 NSMT-P 72341 NSMT-P 72341 This study
Lampanyctus macdonaldi AP012241 ZMUC #8077 ZMUC P2393967 This study
Lampanyctus crocodilus AP012258 ZMUC #8076 ZMUC P2393968 This study
Lobianchia gemellarii AP012242 ME 4239#6 ZMUB O.1725 This study
Myctophum affine AP002922 Miya et al. 2001 [33]
Myctophum asperum AP012234 NSMT-P 91490 NSMT-P 91490 This study
Myctophum nitidulum AP012255 NSMT-P 92345 NSMT-P 92345 This study
Myctophum orientale AP012254 NSMT-P 77350 NSMT-P 77350 This study
Myctophum punctatum AP012239 ZMUC #6594 ZMUC P2393969 This study
Nannobrachium ritteri AP012247 KU 2237 KU 28276 This study
Notoscopelus caudispinosus AP012256 KU 5301 MCZ 161883 This study
Notoscopelus japonicus AP012252 BSKU 103772 BSKU 103772 This study
Notoscopelus kroyeri AP012262 ZMUC #8078 ZMUC P2393970 This study
Notolychnus valdiviae AP012229 NSMT-P 102930 NSMT-P 102930 This study
Protomyctophum arcticum AB648909-10 ZMUC #8476 ZMUC P2393971 This study
Stenobrachius leucopsarus AP012245 NSMT-P 78748 NSMT-P 78748 This study
Symbolophorus californiensis AP012246 NSMT-P 92257 NSMT-P 92257 This study
Taaningichthys minimus AP012244 ME 5633 ZMUB 18049 This study
Triphoturus nigrescens AP012243 NSMT-P 102934 NSMT-P 102934 This study
Ophidiiformes Cataetyx rubrirostris AP004407 Miya et al. 2003 [46]
Carapus bermudensis AP004404 Miya et al. 2003 [46]
Bassozetus zenkevitchi AP004405 Miya et al. 2003 [46]
Lophiiformes Sladenia gardineri AB282827 Miya et al. 2010 [47]
Coelophrys brevicaudata AB282834 Miya et al. 2010 [47]
Thaumatichthys pagidostomus AB282847 Miya et al. 2010 [47]
Percopsiformes Percopsis transmontana AP002928 Miya et al. 2001 [33]
Aphredoderus sayanus AP004403 Miya et al. 2003 [46]
Polymixiiformes Polymixia japonica AB034826 Miya & Nishida 2000 [44]
Polymixia lowei AP002927 Miya et al. 2001 [33]
Gadiformes Stylephorus chordatus AB280688 Miya et al. 2007
Bregmaceros transmontana AP004411 Miya et al. 2003 [46]
Trachyrincus murrayi AP008990 Satoh et al. 2006 [48]
Lota lota AP004412 Miya et al. 2003 [46]
Zeiformes Zeus faber AP002941 Miya et al. 2001 [33]
Parazen pacificus AP004433 Miya et al. 2003 [46]
Zenion japonicum AP004434 Miya et al. 2003 [46]

Taxa included in this study listed according to ordinal classification. Mitogenome accession number, tissue number, specimen + institute number and study noted if information available.

Poulsen et al.

Poulsen et al. BMC Evolutionary Biology 2013 13:111   doi:10.1186/1471-2148-13-111

Open Data