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Open Access Research article

Variation of presence/absence genes among Arabidopsis populations

Shengjun Tan, Yan Zhong, Huan Hou, Sihai Yang* and Dacheng Tian*

State Key Laboratory of Pharmaceutical Biotechnology, Department of Biology, Nanjing University, Nanjing, 210093, China

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BMC Evolutionary Biology 2012, 12:86 doi:10.1186/1471-2148-12-86

Published: 14 June 2012

Additional files

Additional file 1 :

Table S2.The genotyping results.

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Additional file 2 :

Table S4.Primer information for the PCR amplification of P/A genes in Table S2.

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Additional file 3 :

Figure S5.The P/A tree and accession tree.

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Additional file 4 :

Table S1.The 80 accessions used in this study.

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Additional file 5 :

Figure S1.Distributions of P/A genes on chromosomes.

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Additional file 6 :

Table S3.Distributions of P/A genes on chromosomes.

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Additional file 7 :

Figure S3.GO categories of P/A genes.

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Additional file 8 :

Figure S2.Distributions of clustered P/A genes on chromosomes.

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Additional file 9 :

Figure S4.Co-variation between absent allele frequency and nucleotide diversity or gene length.

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