Table 2

Conifer genes involved in defense, resistance and response against insects with dN/dS > 1

Spruce clone ID

Pine UniGene ID

dN/dS

UniProt ID

Species

Putative function


WS02821_B21

DT625383

7.3061

A7P5L0

Vitis vinifera

Protein phosphatase/Serine/threonine phosphatases


WS0297_D22

CX645632

7.0185

A7QNM9

Vitis vinifera

leucine-rich repeat family protein/binding protein


WS02725_C02

DR097823

6.5839

A7P656

Vitis vinifera

Protein phosphatase 2C/hydrolase/metal-binding


WS02757_H19

DR165429

4.4902

Q9SE11

Funaria hygrometrica

Chloroplast-localized small heat shock protein (HSP20) family


WS02758_N18

DR160912

4.4589

Q0DTD2

Oryza sativa subsp. japonica

Heat shock protein DnaJ


WS02741_E07

DT634060

3.3785

Q588B8

Cryptomeria japonica

Glycoside Hydrolase Family 17


WS02761 N01

CO365391

3.0817

A7PWA7

Vitis vinifera

Heat shock protein DnaJ


WS02817_M06

DR093347

2.9656

A7NWZ2

Vitis vinifera

serine/threonine-specific protein kinase


WS0272_J12

DR015390

2.3311

A7QFY4

Vitis vinifera

Heat shock protein DnaJ


WS0454_E20

DR049906

2.2728

A0MMD5

Litchi chinensis

Xyloglucan endotransglycosylase (Glycoside hydrolase family)


WS02774_M01

DR060506

2.1005

Q6VAA9

Stevia rebaudiana

UDP-glycosyltransferase


WS02749_F04

CO164226

1.7421

Q9MA24

Arabidopsis thaliana

Glycosyltransferase


WS0288_C08

DR022129

1.5822

A7QTB5

Vitis vinifera

Glycoside hydrolase


WS0292_O15

DR681862

1.294

A7P0R3

Vitis vinifera

heat shock protein (hsp70)


WS02729_N15

DR689530

1.1356

Q8LHS7

Oryza sativa subsp. japonica

Histone deacetylase


WS02716_E18

AI784893

1.1314

A5AWM3

Vitis vinifera

Pathogenesis-related transcriptional activator PTI6


WS0298_F15

DT638459

1.0692

A7QTU5

Vitis vinifera

Glycosyltransferase


WS02725_E03

U39301

1.0481

A0ERF9

Cathaya argyrophylla

Caffeic acid ortho-methyltransferase


Buschiazzo et al. BMC Evolutionary Biology 2012 12:8   doi:10.1186/1471-2148-12-8

Open Data