Table 1

Members of the SET gene family in Populus

Gene name

Protein length

subfamily*

ESTs

Gene position

Gene Model


PoSuvh2

453

Suv

-

LG_VIII(11654980-11656338)

gw1.VIII.652.1


PoSuvh9

519

Suv

6

LG_X(5498008-5499564)

gw1.X.4649.1


PoSuvh5

513

Suv

-

LG_III(9558215-9561181)

gw1.118.279.1


PoSuvh4a

486

Suv

-

LG_III(14574409-14583315)

gw1.III.353.1


PoSuvh4b

525

Suv

8

LG_II(22271452-22288911)

gw1.II.373.1


PoSuvh4c

509

Suv

-

LG_XIV(7067483-7077824)

gw1.XIV.3033.1


PoSuvh3

496

Suv

-

LG_VI(1774010-1775496)

gw1.VI.98.1


PoSuvh10

496

Suv

7

LG_XVI(1303523-1305010)

gw1.XVI.1034.1


PoSuvh1

653

Suv

2

LG_III(17984592-17986613)

fgenesh4_pg.C_LG_III001771


PoSuvh7

512

Suv

7

LG_I(1436489-1438607)

estExt_Genewise1_v1.C_LG_I6844


PoSuvr5a

1428

Suv

-

LG_V(4008809-4012099)

gw1.V.3747.1


PoSuvr5b

1517

Suv

5

LG_VII(10134577-10137249)

estExt_Genewise1_v1.C_LG_VII3275


PoSuvr1

296

Suv

-

LG_IV(16108605-16109961)

gw1.IV.1292.1


PoSuvr2

414

Suv

-

LG_IX(1847452-1849907)

gw1.IX.1069.1


PoSuvr4

401

Suv

3

LG_XIII(3470303-3478528)

gw1.XIII.1724.1


PoSuvr4a

714

Suv

2

LG_XIV(12538712-12542929)

gw1.XIV.76.1


PoSuvr4b

464

Suv

4

LG_II(23795948-23799204)

gw1.II.215.1


PoSuvr3

340

Suv

5

LG_XIII(4848844-4850695)

gw1.XIII.2167.1


PoAtxr6a

319

Atxr5

-

LG_XII(2169730-2172278)

gw1.XII.888.1


PoAtxr6b

325

Atxr5

-

LG_XV(668228-670843)

gw1.XV.292.1


PoAtxr5a

304

Atxr5

9

LG_VII(2505750-2509040)

fgenesh4_pm.C_LG_VII000124


PoAtxr5b

333

Atxr5

1

LG_V(3899727-3900751)

gw1.70.74.1


PoAshh3

351

Ash

8

LG_XVII(191202-195604)

eugene3.01700004


PoAshh4

281

Ash

7

LG_VII(13836-18843)

eugene3.00070002


PoAshh1

495

Ash

8

LG_V(13318562-13324389)

fgenesh4_pm.C_LG_V000437


PoAshr3

402

Ash

-

LG_XVIII(10390889-10400394)

gw1.XVIII.3091.1


PoAshh2a

605

Ash

1

LG_II(5451879-5460030)

eugene3.00020732


PoAshh2b

594

Ash

-

LG_V(1177943-12003046)

gw1.V.27.1


PoAtxr3a

2350

Atxr3

7

LG_VII(1678369-1689434)

fgenesh4_pg.C_LG_VII000266


PoAtxr3b

2476

Atxr3

28

LG_XVII(5241549-5229352)

eugene3.00640010


PoSwna

852

E(z)

10

LG_II(16109075-16116062)

gw1.II.890.1


PoSwnb

812

E(z)

1

LG_XIV(5213392-5220923)

estExt_Genewise1_v1.C_LG_XIV2284


PoClfa

917

E(z)

5

LG_V(5117508-5125370)

estExt_fgenesh4_pg.C_LG_V0535


PoClfb

892

E(z)

1

LG_VII(8674891-8681980)

estExt_Genewise1_v1.C_LG_VII2923


PoAtxr7a

1390

Trx

2

LG_II(69963-76718)

fgenesh4_pg.C_LG_II000009


PoAtxr7b

1149

Trx

3

LG_V(25489363-25495946)

POPTR_0005s28130


PoAtx6

712

Trx

-

LG_XVIII(1929427-1923848)

POPTR_0018s02170


PoAtx1

1014

Trx

6

LG_II(20140580-20153598)

fgenesh4_pg.C_LG_II002136


PoAtx2

1050

Trx

5

LG_XIV(7247301-7259403)

gw1.XIV.3109.1


PoAtx3a

667

Trx

2

LG_II(13105976-13113638)

fgenesh4_pg.C_LG_II001571


PoAtx3b

908

Trx

6

LG_XIV(3468877-3477546)

gw1.XIV.1697.1


PoAtx5

1070

Trx

3

LG_XV(992498-1001204)

gw1.XV.426.1


PoAtx4

1078

Trx

4

LG_XII(1824820-1833670)

gw1.XII.196.1


PoAshr2

326

SMYD

3

LG_I(5175894-5176871)

gw1.I.8071.1


PoAtxr4

283

SMYD

7

LG_VI(5075142-10640133)

gw1.VI.14.1


PoAtxr1

542

SMYD

-

LG_VIII(5563751-5563753)

fgenesh4_pg.C_LG_VIII000780


PoAtxr2

398

SMYD

9

LG_XVII(5018556-5014447)

estExt_fgenesh4_pm.C_640013


PoAshr1

458

SMYD

4

LG_V(11020007-11025452)

eugene3.00050808


PoSetd8

167

SETD

4

LG_III(13995189-13996722)

gw1.III.385.1


PoSetd3

362

SETD

1

LG_VIII(8841653-8843777)

fgenesh4_pg.C_LG_VIII001195


PoSetd4

513

SETD

2

LG_VI(16825966-16820213)

POPTR_0006s18410


PoSetd7

468

SETD

2

LG_IV(11613451-11616746)

gw1.IV.4590.1


PoSetd10

444

SETD

12

LG_IV(7403229-7405799)

gw1.IV.3768.1


PoSetd6

439

SETD

1

LG_VIII(2548612-2554748)

gw1.VIII.1187.1


PoSetd9

502

SETD

9

LG_VII(9438694-9433649)

eugene3.01730002


PoSetd5

503

SETD

12

LG_XIV(9526856-9530848)

eugene3.00141165


PoSetd1

551

SETD

4

LG_XIV(2038778-2044599)

gw1.XIV.1045.1


PoSetd2a

490

SETD

7

LG_VIII(5640809-5644314)

gw1.VIII.2559.1


PoSetd2b

345

SETD

-

LG_X(15047671-15051672)

gw1.X.1011.1


* Represent the subfamilies shown in Figure 1

Lei et al. BMC Evolutionary Biology 2012 12:51   doi:10.1186/1471-2148-12-51

Open Data