Table 1

Characteristics of the datasets used
SP-70 L POS SP-70 L NEG UP-50 L POS UP-50 L NEG UP-70 L POS UP-70 L NEG
Number of pairs 42 92 86 201 65 107
Mean (± stdev) number of sequences per alignment 15 ± 7 14 ± 4.4 32 ± 13 25 ± 12 25 ± 11 20 ± 7.8
Median number of sequences per alignment 12 12 33 24 23 19
Full MSA
Mean genetic distance 1.297 1.694 1.567 1.779 1.394 1.548
Alignment Length 582 687 865 1008 755 796
Dataset containing maximum of 20% gapped columns in a MSA
Mean genetic distance 1.198 1.581 1.369 1.556 1.253 1.391
Alignment Length 420 502 491 598 516 540

Swapna et al.

Swapna et al. BMC Evolutionary Biology 2012 12:238   doi:10.1186/1471-2148-12-238

Open Data