Table 2

Summary of MHC variation in R. roxellana populations
MHC Population N Variable sites Parsimony- informative sites Total alleles Private alleles H AR Over mean distance FIS
DQA1 SG 25 59 29 6 1 0.798 5.628 0.118±0.016 0.675
QL 22 48 30 8 3 0.851 7.661 0.090±0.013 0.511
SNJ 17 43 7 4 0 0.671 4.000 0.090±0.015 0.123
All 64 61 33 9 - 0.972 7.503 0.102±0.014 0.495
DQB1 SG 25 65 32 7 3 0.768 6.126 0.115±0.015 0.325
QL 22 57 36 11 6 0.861 9.962 0.085±0.012 0.452
SNJ 17 47 20 5 2 0.743 5.000 0.092±0.014 0.251
All 64 70 56 16 - 0.891 9.587 0.097±0.012 0.360

Private alleles, alleles only found in this population; h, genetic variation; AR, allele richness; FIS, inbreeding coefficient.

Luo et al.

Luo et al. BMC Evolutionary Biology 2012 12:207   doi:10.1186/1471-2148-12-207

Open Data