Table 2

Likelihood ratio test analysis and dN/dS ratios for MSTN-1a and MSTN-1b
Foregroun branch P-value Likehood ratio test p0 p1 W0 W2
1 1 0 0.78604 0.0735 0.06418 1
2 1 0 0.91449 0.08551 0.06418 1
3 1 0 0.87254 0.08151 0.06349 1
4 1 0 0.84418 0.0783 0.06256 1
5 1 0 0.75124 0.07563 0.05589 1
6 1 0 0.7823 0.07315 0.06418 1.0937
7 1 0 0.78494 0.0734 0.06418 1.0519
8 0.837932705 0.041836 0.8317 0.06936 0.06127 1.53474
9 0.435190969 0.60893 0 0 0.05808 116.56426
10 1 0 0.91449 0.08551 0.06418 1
11 0.480047236 0.498756 0 0 0.05991 154.56582
12 0.998871621 2.00E-06 0.78682 0.07357 0.06418 1.05741
13 0.998871621 2.00E-06 0.78321 0.07324 0.06418 1
14 1 0 0.91449 0.08551 0.06418 1
15 1 0 0.91449 0.08551 0.06418 1
16 1 0 0.91449 0.08551 0.06418 1
17 1 0 0.91449 0.08551 0.06418 1
18 0.02608246 4.950544 0.91976 0.07657 0.06708 998.99999
19 1 0 0.77391 0.07197 0.06306 1
20 1 0 0.91449 0.08551 0.06418 1
21 0.80351773 0.0619 0 0 0.06339 104.27124
22 1 0 0.91449 0.18551 0.06418 1
23 1 0 0.7271 0.06908 0.05868 1
24 1 0 0.91149 0.08551 0.06418 1
25 1 0 0.91149 0.08551 0.06418 1
26 1 0 0.91149 0.08551 0.06418 1
27 1 0 0.91149 0.08551 0.06418 1
28 0.998871621 2.00E-06 0.78417 0.07332 0.16418 1.04859
29 0.998404232 4.00E-06 0.78127 0.07305 0.16418 1.06811
30 1 0 0.91449 0.08551 0.06418 1
31 1 0 0.77679 0.07263 0.16418 1.34502
32 1 0 0.91149 0.08551 0.16418 1
33 1 0 0.91149 0.8551 0.06418 1
34 0.001154703 10.561454 0.9179 0.72176 0.06509 103.9286
35 0.009387076 10.945966 0.91398 0.07251 0.0627 999
36 1 0 0.78794 0.07368 0.06418 1

Summary statistics generated for each foreground branch using a Branch-site test. Branches in bold and italics are are statistically significant with a dN/dS ratio greater than 1. Branch numbers are labeled in Figure 7.

Lawson et al.

Lawson et al. BMC Evolutionary Biology 2012 12:202   doi:10.1186/1471-2148-12-202

Open Data