Additional file 5.Trends in bootstrap support values and topologies for likelihood analyses of alignment partitions (tree-dependent). For tree-dependent site variability analyses, the following are shown: a) Distributions of bootstrap support values for all nodes. Circles represent median bootstrap support for each A_{n} partition size. b) Distribution of branch score metric (triangles) and partition metric (circles) values for tests of topological congruence between A_{n} and corresponding B_{n} data partitions. Partition metric values shown are 0.1× actual value in order to fit on same scale with branch score values. Format: PDF Size: 710KB Download file This file can be viewed with: Adobe Acrobat Reader Parks et al. BMC Evolutionary Biology 2012 12:100 doi:10.1186/1471-2148-12-100 |