Additional file 3.

Average per site rate variability of plastome regions for full plastome alignment using tree-dependent methodology. Average per site category ranking for protein-coding exons, introns, rRNA and tRNA genes, and noncoding regions for full plastome alignment of 113 Pinus and Pinaceae species using tree-dependent methodology. Standard deviations are given in parentheses. Mean values with different superscript letters are significantly different at α < 0.05 in Tukey’s HSD test, following one-way ANOVA supporting different means at p < 0.0001.

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Parks et al. BMC Evolutionary Biology 2012 12:100   doi:10.1186/1471-2148-12-100