Figure 2.

Strict consensus of the six most parsimonious trees. The most parsimonious tree (8458 steps, CI: 33, RI: 62) obtained from the default alignment, summarising parsimony, maximum likelihood and Bayesian inference supports. Clade support: black square, supported by Parsimony jackknife > 70%, Maximum likelihood bootstrap > 70%, and Bayesian posterior probability > 0.95; grey square, clade recovered but with support below the threshold value above; white squares, clade not recovered. Upper line: parsimony on default alignment (left), parsimony on gappy alignment (centre), parsimony on compressed alignment (right); middle line: Maximum likelihood on partition scheme P1 (left), P2 (centre), P3 (right); lower line: Bayesian inference on partition scheme P1 (left), P2 (centre), P3 (right).

Bidegaray-Batista and Arnedo BMC Evolutionary Biology 2011 11:317   doi:10.1186/1471-2148-11-317
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