Table 2

Genetic variation within the 82 bp sequenced region in modern tissue of known species and unknown variants in fossil material.

Taxonomic ID [Genbank Number]

Mutations

Fagaceae [HQ333118] △

American Beech 1

G

G

C

A

A

T

A

A

G

G

T

T

G

C

G

Chestnut

G

G

C

A

A

T

A

A

G

G

T

T

G

C

G

Red oak

G

G

C

A

A

T

A

A

G

G

T

T

G

C

G

Northern Pin Oak

G

G

C

A

A

T

A

A

G

G

T

T

G

C

G

Pin Oak

G

G

C

A

A

T

A

A

G

G

T

T

G

C

G

Black Oak

G

G

C

A

A

T

A

A

G

G

T

T

G

C

G

American Beech 2 [HQ333119] +

G

G

C

A

A

T

A

C

G

G

T

T

G

C

G

Sapindaceae [HQ333120] ×

Red Maple

G

G

C

A

A

T

A

A

A

G

T

T

G

T

G

Sugar Maple

G

G

C

A

A

T

A

A

A

G

T

T

G

T

G

Betulaceae [HQ333117] ○

Yellow Birch

G

G

C

A

A

T

A

A

G

G

T

T

G

A

A

Paper Birch

G

G

C

A

A

T

A

A

G

G

T

T

G

A

A

Black Birch

G

G

C

A

A

T

A

A

G

G

T

T

G

A

A

UNKNOWN 1 [HQ333121] ▽

*

G

A

C

A

A

T

A

A

C

G

T

T

G

T

G

UNKNOWN 2 [HQ333122] ◇

*

G

G

T

A

A

T

A

A

G

G

T

T

G

A

A

UNKNOWN 3 [HQ333123] □

G

G

C

A

A

A

A

A

G

G

A

T

G

A

G

UNKNOWN 4 [HQ333124] ✴

*

G

G

C

A

A

T

A

A

A

G

T

T

G

A

A

UNKNOWN 5 [HQ333125]

G

G

:

:

:

:

:

:

G

G

T

T

G

C

G

UNKNOWN 6 [HQ333126]

*

G

G

C

A

A

T

A

A

G

G

T

T

A

A

A

UNKNOWN 7 [HQ333127] ✡

*

A

G

C

A

A

T

A

A

G

G

T

T

G

A

A

UNKNOWN 8 [HQ333128] ⊞

*

G

G

C

A

A

T

A

A

G

A

T

T

G

A

A

UNKNOWN 9 [HQ333129] ⊗

G

G

C

A

A

T

A

A

G

G

T

:

G

A

A

UNKNOWN 10 [HQ333130]

*

G

G

C

A

A

T

A

A

A

G

T

:

G

A

A

UNKNOWN 11 [HQ333131] ■

*

G

A

C

A

A

T

A

A

G

G

T

T

G

A

A

UNKNOWN 12 [HQ333132] ◆

*

G

G

C

A

A

T

A

A

A

G

T

T

G

C

G

Mutations are in bold. Symbols correspond with Figures 5 and 6. Asterisks indicate mutations that are consistent with potential DNA damage.

Anderson-Carpenter et al. BMC Evolutionary Biology 2011 11:30   doi:10.1186/1471-2148-11-30