Table 2

Recent selection on the newly generated CG dinucleotides in different mutation categories

Transition-generated CG

Control for transition-generated CG

Transversion-generated CG

Control for transversion-generated CG


Population

Proportion indicating positive selection1.

DAF of the positive selected CG2.

general DAF3.

Proportion indicating positive selection

DAF of the selected CG

general DAF

Proportion indicating

negative selection1.

DAF of the negative selected CG2.

general DAF

Proportion indicating negative selection

DAF of the selected CG

general DAF


YRI

0.019

0.354

0.370

0.021

0.348

0.353

0.021

0.319

0.333

0.021

0.338

0.349

CEU

0.015

0.425

0.412

0.016

0.446

0.403

0.022

0.375

0.387

0.026

0.353

0.399

ASN

0.014

0.465

0.428

0.016

0.452

0.418

0.024

0.345

0.407

0.026

0.368

0.414


1. Proportion of the SNPs whose iHs < -2 (positive selection) or iHs > 2 (negative selection) among all SNPs;

2. DAF for SNPs with iHs < -2(positive selection) or iHs > 2(negative selection);

3. DAF for all SNPs.

Li and Chen BMC Evolutionary Biology 2011 11:3   doi:10.1186/1471-2148-11-3

Open Data