Table 3 |
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|
Divergence times of major splits in the malarial phylogeny as estimated by MultiDivTime and BEAST |
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|
Calibrations: node56, min = 6, max = 8; ABSMAX = 91 |
MultiDivTime (MDT) |
Beast |
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|
|
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|
Divergence |
Node |
Node Age (Mya) |
95% CrI |
Node Age (Mya) |
95% CrI |
cCrIs |
|
|
||||||
|
Origin of Southerm Asia Macaca species |
55 |
4.55 |
3.53, 5.64 |
3.62 |
2.76, 4.60 |
2.76-5.64 |
|
Split P. cynomolgi-P. vivax |
52 |
2.50 |
1.77, 3.39 |
2.09 |
1.31, 2.90 |
1.31- 3.39 |
|
Origin of Catarrhini parasite (excluding P. ovale) |
57 |
14.20 |
11.22, 17.48 |
13.52 |
10.26, 17.29 |
10.26-17.48 |
|
Split Papio-Macaca |
56 |
7.39 |
6.26, 7.98 |
6.79 |
6.00, 7.80 |
6.00-7.98 |
|
Lorisiforms-Catarrhini parasite |
58 |
16.31 |
12.75, 20.38 |
15.66 |
12.14, 19.67 |
12.14-20.38 |
|
Radiation Lorisiforms parasite |
42 |
12.31 |
9.19, 16.05 |
12.41 |
9.52, 15.78 |
9.19-16.05 |
|
Radiation Apes parasite |
35 |
9.07 |
6.12, 12.9 |
9.80 |
6.97, 13.06 |
6.12-13.06 |
|
Radiation Rodents parasite |
38 |
9.57 |
6.62, 13.36 |
7.61 |
5.30, 10.34 |
5.30-13.36 |
|
Split P. falciparum-P. reichenowi |
33 |
2.96 |
1.75, 4.71 |
3.42 |
2.25, 4.67 |
1.75-4.71 |
|
Origin of P. falciparum |
31 |
0.27 |
0.03, 0.67 |
0.25 |
0.10, 0.43 |
0.03-0.67 |
|
Origin of Plasmodium in mammals |
60 |
24.97 |
19.04, 32.27 |
21.56 |
16.46, 26.86 |
16.46-32.27 |
|
|
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|
Calibrations: node56, min = 6, max = 14.3; ABSMAX = 91 |
||||||
|
|
||||||
|
Origin of Southerm Asia Macaca species |
55 |
7.62 |
5.13, 9.83 |
3.98 |
2.65, 5.89 |
2.65-9.83 |
|
Split P. cynomolgi-P. vivax |
52 |
4.28 |
2.68, 6.09 |
2.30 |
1.22, 3.58 |
1.22-6.09 |
|
Origin of Catarrhini parasite (excluding P. ovale) |
57 |
22.53 |
15.83, 28.79 |
14.76 |
9.86, 21.82 |
9.86-28.79 |
|
Split Papio-Macaca |
56 |
12.41 |
8.83, 14.24 |
7.46 |
6.00, 10.71 |
6.00-14.24 |
|
Lorisiforms-Catarrhini parasite |
58 |
25.48 |
17.90, 33.14 |
17.11 |
11.71, 24.94 |
11.71-33.14 |
|
Radiation Lorisiforms parasite |
42 |
18.99 |
12.82, 25.63 |
13.60 |
9.20, 19.91 |
9.20-25.63 |
|
Radiation Apes parasite |
35 |
13.92 |
8.86, 20.10 |
10.83 |
6.76, 16.36 |
6.76-20.10 |
|
Radiation Rodents parasite |
38 |
15.12 |
9.58, 21.72 |
8.32 |
5.10, 12.60 |
5.10-22.71 |
|
Split P. falciparum-P. reichenowi |
33 |
4.66 |
2.61, 7.54 |
3.77 |
2.21, 5.84 |
2.21-7.54 |
|
Origin of P. falciparum |
31 |
0.42 |
0.04, 1.08 |
0.28 |
0.10-0.50 |
0.01-1.08 |
|
Origin of Plasmodium in mammals |
60 |
37.78 |
26.24, 50.26 |
23.73 |
16.18, 35.02 |
16.18-50.26 |
|
|
||||||
|
Calibrations: node56, min = 6, max = 14.3; node57, min = 23.5; ABSMAX = 91 |
||||||
|
|
||||||
|
Origin of Southerm Asia Macaca species |
55 |
8.28 |
6.50, 10.23 |
6.75 |
5.12, 8.42 |
5.12-10.23 |
|
Split P. cynomolgi-P. vivax |
52 |
4.66 |
3.30, 6.29 |
3.93 |
2.50, 5.43 |
2.50-6.29 |
|
Origin of Catarrhini parasite (excluding P. ovale) |
57 |
25.70 |
23.58, 30.09 |
26.27 |
23.5, 31.12 |
23.50-31.12 |
|
Split Papio-Macaca |
56 |
13.41 |
11.58, 14.27 |
12.09 |
9.80, 14.30 |
9.80-14.30 |
|
Lorisiforms-Catarrhini parasite |
58 |
28.91 |
25.17, 34.60 |
29.83 |
24.97, 35.72 |
24.97-35.72 |
|
Radiation Lorisiforms parasite |
42 |
21.49 |
17.21, 26.88 |
23.59 |
18.93, 28.79 |
17.21-28.79 |
|
Radiation Apes parasite |
35 |
15.78 |
11.29, 21.64 |
18.37 |
12.79, 24.03 |
11.29-24.03 |
|
Radiation Rodents parasite |
38 |
17.20 |
12.46, 23.08 |
14.20 |
9.96, 18.89 |
9.96-23.08 |
|
Split P. falciparum-P. reichenowi |
33 |
5.27 |
3.18, 8.23 |
6.39 |
4.27, 8.64 |
3.18-8.64 |
|
Origin of P. falciparum |
31 |
0.48 |
0.04, 1.22 |
0.48 |
0.19, 0.81 |
0.04-1.22 |
|
Origin of Plasmodium in mammals |
60 |
42.72 |
35.24, 53.03 |
40.97 |
32.89, 50.18 |
32.24-53.03 |
|
|
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|
Point time estimates and their associated 95% credibility intervals (CrIs) are shown in millions of years (Mya). Combined CrIs are also shown (cCrIs). Node numbers are listed in additional file 4. The absolute maximum for the ingroup root node (ABSMAX) was set at 91 Mya (see Methods for more details). |
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|
Pacheco et al. BMC Evolutionary Biology 2011 11:299 doi:10.1186/1471-2148-11-299 |
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