Table 3

Tests of heterozygote deficiency and linkage disequilibria

Hzf-Mg

Abt-Mm

Mtk-Mg

Mtk-Mm

Tml-Mg

Tml-Mm


FIS 33104

0.085

-0.069

-0.115

0.023

0.013

-0.003

FIS Mm21

0.000

-0.050

0.438*

0.110

0.041

-0.029

FIS Mm22

-0.047

0.455*

-0.034

0.290*

0.024

0.158

FIS Mm30

0.122

0.320

0.436

0.228*

-0.120

0.269

FIS Mm39

-0.157

0.080

-0.071

0.009

0.109

0.233

FIS Mm42

0.045

0.356

0.369

0.327*

0.032

0.216

FIS Mm43

0.109

0.632*

0.513

0.316*

0.563*

0.302

FIS Mm51

0.068

0.348

-0.229

0.126

0.204

-0.304

FIS Mm60

0.007

-0.061

-0.017

0.075

-0.106

-0.038

FIS All Loci

0.023

0.210*

0.139*

0.166*

0.083

0.101*

LD

9

12

11

16

5

7


The table displays FIS for each locus, FIS over all loci and the number of locus pairs in significant linkage disequilibrium for each sample. Hzf, Abt, Mtk, Tml: abbreviations of sampling sites; Mg: individuals with griseorufus-like mitochondrial haplotypes, Mm: individuals with murinus-like mitochondrial haplotypes. Asterisks denote significant heterozygote deficiency after strict Bonferroni correction. Nominal level: 0.05, adjusted p for tests for each locus in each sample: 0.00093, adjusted p for tests over all loci: 0.00833. P-values were obtained after 54,000 randomizations of the original data. No significant heterozygote excess was observed. LD: number of locus pairs in significant linkage disequilibrium after strict Bonferroni correction (nominal level: 0.05, adjusted p: 0.00023).

Hapke et al. BMC Evolutionary Biology 2011 11:297   doi:10.1186/1471-2148-11-297

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