Table 4 |
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|
Results of tests for zero-length branches on gene trees |
|||
|
gene |
collapsed nodesa |
Dli simulationsb |
Dli mainc |
|
|
|||
|
BRCA1 |
A+B+C+D+E+1 |
0.197 - 12.408 |
3.238 |
|
RAG1 |
A+C+D+E |
0.054 - 14.313 |
10.61 |
|
vWF |
A+B+C+D+E |
0.893 - 13.801 |
5.479 |
|
12S16S |
A+B+C+E+1 |
0.773 - 9.641 |
6.007 |
|
combined |
A+B+C |
0.043 - 5.656 |
4.496 |
|
|
|||
|
a Nodes are labeled on Figure 2 of the manuscript. b Range of the likelihood differences between collapsed tree and best tree obtained over 100 simulations, representing the null distribution for the main likelihood comparison. c Likelihood difference between the collapsed tree and the actual best tree. |
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|
Almeida et al. BMC Evolutionary Biology 2011 11:281 doi:10.1186/1471-2148-11-281 |
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