Table 3

Haplotype, genotype and nucleotide diversity values in populations and groups for each gene

COI (699bp)

CYB (598bp)

N13 (336bp)


Population

NT

h

S

HD

π

NT

h

S

HD

π

NT

NHT

NP

h

S

HD

π

g

GD


BAR_MON

35

1

0

0

0

35

1

0

0

0

33

32

66

2

2

0.507

0.0030

2

0.061

W

MEN_GOR

19

1

0

0

0

19

1

0

0

0

19

1

38

2

1

0.053

0.0002

2

0.105

MEN_MER

20

1

0

0

0

20

1

0

0

0

18

1

36

2

1

0.056

0.0002

2

0.111


SAR_AST

14

1

0

0

0

13

1

0

0

0

13

2

26

5

6

0.406

0.0051

4

0.423

SAR_VAL

20

2

1

0.189

0.0003

17

1

0

0

0

14

4

28

3

3

0.611

0.0046

4

0.736

C

SAR_CAR

13

2

1

0.513

0.0007

4

1

0

0

0

4

1

8

3

3

0.679

0.0049

3

0.833

SAR_SIL

12

2

1

0.167

0.0002

12

2

1

0.409

0.0007

12

9

24

5

7

0.768

0.0103

5

0.833

COR_CAN

11

1

0

0

0

10

2

1

0.200

0.0003

10

2

20

3

3

0.611

0.0046

3

0.689


TUN_LEB

25

3

2

0.157

0.0002

18

2

1

0.111

0.0002

8

0

16

1

0

0

0

1

0

S

SIC_MAZ

28

1

0

0

0

27

2

1

0.271

0.0029

27

16

54

3

5

0.551

0.0060

5

0.715

SIC_MAR

19

1

0

0

0

18

1

0

0

0

19

0

38

1

0

0

0

1

0


WEST

74

1

0

0

0

74

2

1

0.400

0.0006

70

34

140

4

3

0.625

0.0022

5

0.548

CENTRAL

70

4

3

0.509

0.0007

56

3

2

0.305

0.0005

53

18

106

7

7

0.682

0.0071

9

0.746

SOUTHEAST

72

4

3

0.478

0.0007

63

5

9

0.509

0.0038

54

16

108

3

5

0.352

0.0037

5

0.534


TOTAL

216

8

37

0.773

0.0223

193

10

28

0.803

0.0168

177

68

354

14

15

0.853

0.0081

19

0.865


NT, number of sequences; NHT, number of heterozygous individuals for N13; NP, number of sequences after haplotype reconstruction; h, number of haplotypes; S, number of polymorphic sites; HD, haplotype diversity; π, nucleotide diversity; g, number of genotypes; GD, genotype diversity; W, west group; C, central group; S, southeast group.

Lázaro et al. BMC Evolutionary Biology 2011 11:274   doi:10.1186/1471-2148-11-274

Open Data