Table 3 |
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|
Haplotype, genotype and nucleotide diversity values in populations and groups for each gene |
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|
COI (699bp) |
CYB (598bp) |
N13 (336bp) |
||||||||||||||||||
|
|
||||||||||||||||||||
|
Population |
NT |
h |
S |
HD |
π |
NT |
h |
S |
HD |
π |
NT |
NHT |
NP |
h |
S |
HD |
π |
g |
GD |
|
|
|
||||||||||||||||||||
|
BAR_MON |
35 |
1 |
0 |
0 |
0 |
35 |
1 |
0 |
0 |
0 |
33 |
32 |
66 |
2 |
2 |
0.507 |
0.0030 |
2 |
0.061 |
|
|
W |
MEN_GOR |
19 |
1 |
0 |
0 |
0 |
19 |
1 |
0 |
0 |
0 |
19 |
1 |
38 |
2 |
1 |
0.053 |
0.0002 |
2 |
0.105 |
|
MEN_MER |
20 |
1 |
0 |
0 |
0 |
20 |
1 |
0 |
0 |
0 |
18 |
1 |
36 |
2 |
1 |
0.056 |
0.0002 |
2 |
0.111 |
|
|
|
||||||||||||||||||||
|
SAR_AST |
14 |
1 |
0 |
0 |
0 |
13 |
1 |
0 |
0 |
0 |
13 |
2 |
26 |
5 |
6 |
0.406 |
0.0051 |
4 |
0.423 |
|
|
SAR_VAL |
20 |
2 |
1 |
0.189 |
0.0003 |
17 |
1 |
0 |
0 |
0 |
14 |
4 |
28 |
3 |
3 |
0.611 |
0.0046 |
4 |
0.736 |
|
|
C |
SAR_CAR |
13 |
2 |
1 |
0.513 |
0.0007 |
4 |
1 |
0 |
0 |
0 |
4 |
1 |
8 |
3 |
3 |
0.679 |
0.0049 |
3 |
0.833 |
|
SAR_SIL |
12 |
2 |
1 |
0.167 |
0.0002 |
12 |
2 |
1 |
0.409 |
0.0007 |
12 |
9 |
24 |
5 |
7 |
0.768 |
0.0103 |
5 |
0.833 |
|
|
COR_CAN |
11 |
1 |
0 |
0 |
0 |
10 |
2 |
1 |
0.200 |
0.0003 |
10 |
2 |
20 |
3 |
3 |
0.611 |
0.0046 |
3 |
0.689 |
|
|
|
||||||||||||||||||||
|
TUN_LEB |
25 |
3 |
2 |
0.157 |
0.0002 |
18 |
2 |
1 |
0.111 |
0.0002 |
8 |
0 |
16 |
1 |
0 |
0 |
0 |
1 |
0 |
|
|
S |
SIC_MAZ |
28 |
1 |
0 |
0 |
0 |
27 |
2 |
1 |
0.271 |
0.0029 |
27 |
16 |
54 |
3 |
5 |
0.551 |
0.0060 |
5 |
0.715 |
|
SIC_MAR |
19 |
1 |
0 |
0 |
0 |
18 |
1 |
0 |
0 |
0 |
19 |
0 |
38 |
1 |
0 |
0 |
0 |
1 |
0 |
|
|
|
||||||||||||||||||||
|
WEST |
74 |
1 |
0 |
0 |
0 |
74 |
2 |
1 |
0.400 |
0.0006 |
70 |
34 |
140 |
4 |
3 |
0.625 |
0.0022 |
5 |
0.548 |
|
|
CENTRAL |
70 |
4 |
3 |
0.509 |
0.0007 |
56 |
3 |
2 |
0.305 |
0.0005 |
53 |
18 |
106 |
7 |
7 |
0.682 |
0.0071 |
9 |
0.746 |
|
|
SOUTHEAST |
72 |
4 |
3 |
0.478 |
0.0007 |
63 |
5 |
9 |
0.509 |
0.0038 |
54 |
16 |
108 |
3 |
5 |
0.352 |
0.0037 |
5 |
0.534 |
|
|
|
||||||||||||||||||||
|
TOTAL |
216 |
8 |
37 |
0.773 |
0.0223 |
193 |
10 |
28 |
0.803 |
0.0168 |
177 |
68 |
354 |
14 |
15 |
0.853 |
0.0081 |
19 |
0.865 |
|
|
|
||||||||||||||||||||
|
NT, number of sequences; NHT, number of heterozygous individuals for N13; NP, number of sequences after haplotype reconstruction; h, number of haplotypes; S, number of polymorphic sites; HD, haplotype diversity; π, nucleotide diversity; g, number of genotypes; GD, genotype diversity; W, west group; C, central group; S, southeast group. |
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|
Lázaro et al. BMC Evolutionary Biology 2011 11:274 doi:10.1186/1471-2148-11-274 |
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