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Open Access Research article

Genome-wide evidence for positive selection and recombination in Actinobacillus pleuropneumoniae

Zhuofei Xu, Huanchun Chen* and Rui Zhou*

Author Affiliations

Division of Animal Infectious Disease, State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China

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BMC Evolutionary Biology 2011, 11:203  doi:10.1186/1471-2148-11-203

Published: 13 July 2011

Additional files

Additional file 1:

Highly conserved genes in the core genome of A. pleuropneumoniae. Detailed information for individual gene alignment is provided, including nucleotide diversity, informative sites, and codon bias.

Format: XLS Size: 55KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

Detailed information on test of recombination. A. pleuropneumoniae genes showing evidence for recombination detected by at least one method (FDR < 10%).

Format: XLS Size: 92KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 3:

Alignments for positively selective genes. Compressed file containing all alignments for genes under positive selection (FASTA format).

Format: RAR Size: 55KB Download file

Open Data