Table 1

Representation of genes and their amplicon names in each of the four data sets.

Data set


A

B

C

D


Gene

Amplicon name and reference

Length

(bp)

10 g × 27 t

21 g × 27 t

10 g × 57 t

21 g × 27 t


40fin2_3

Phosphogluconate dehydrogenase [36]

750

X

X

42fin1_2

Putative GTP-binding protein [36]

840

X

X

109fin1_2

Gelsolin [36]

552

X

X

X

X

192fin1_2

Glutamyl- & prolyl-tRNA sybphetase [36]

402

X

X

197fin1_2

Triosephosphate isomerase [36]

444

X

X

262fin1_2

Proteasome subunit [36]

501

X

X

265fin2_3

Histidyl-tRNA sybphetase [36]

447

X

X

X

X

268fin1_2

AMP deaminase [36]

768

X

X

X

X

3007fin1_2

Glucose phosphosphate dehydrogenase [36]

621

X

X

X

X

3017fin1_2

Tetrahydrofolate sybphase [36]

594

X

X

3070fin4_5

Alanyl-tRNA sybphetase [36]

705

X

X

8028fin1_2

Nucleolar cysteine-rich protein [36]

324

X

X

8091fin1_2

Glucose phosphate isomerase [36]

666

X

X

acc2_4

Acetyl-coA carboxylase [36]

501

X

X

X

X

CAD

Pyrimidine biosynthesis [85]

2913

X

X

X

X

DDC

Dopa-decarboxylase [86]

708

X

X

X

X

EF-1alpha

Elongation factor-1 alpha [37]

519

X

X

X

X

enolase

Enolase [87]

1134

X

X

X

X

histone 3

Histone 3 [38]

273

X

X

X

X

period

Period [88]

747

X

X

wingless

Wingless [89]

402

X

X


A box with an "X" indicates a gene that was included in that particular data set.

Kawahara et al. BMC Evolutionary Biology 2011 11:182   doi:10.1186/1471-2148-11-182

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