Table 3

Results of the McDonald Kreitman Tests for all genes.

Candidate GRP genes

Test

FS

PS

FN

PN

P value (Fisher's Exact Two Tailed Test)


CIPRO37.40.1

Sympatric Type A vs. Sympatric Type B

0

35

0

36

NA

Allopatric Type A vs. Allopatric Type B

9

38

15

48

0.64

CIPRO60.5.1

Sympatric Type A vs. Sympatric Type B

6

27

7

22

0.76

Allopatric Type A vs. Allopatric Type B

3

16

6

19

0.71

CIPRO100.7.1

Sympatric Type A vs. Sympatric Type B

9

25

12

30

1

Allopatric Type A vs. Allopatric Type B

5

12

8

17

1

Control genes

Test

FS

PS

FN

PN

P value (Fisher's Exact Two Tailed Test)


CIPRO53.35.1

Sympatric Type A vs. Sympatric Type B

0

18

0

7

NA

Allopatric Type A vs. Allopatric Type B

4

17

1

11

0.63

mtCOI

Sympatric Type A vs. Sympatric Type B

76

9

3

1

0.38

Allopatric Type A vs. Allopatric Type B

70

21

3

2

0.59


FS = Fixed Synonymous. PS = Polymorphic Synonymous. FN = Fixed Nonsynonymous. PN = Polymorphic Nonsynonymous

Nydam and Harrison BMC Evolutionary Biology 2011 11:18   doi:10.1186/1471-2148-11-18

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