Table 5

Characteristics of polymorphic microsatellite loci and amplification in the three morphotypes of Corbicula of Western Europe.

Primer name

Morphotype

Repeat type

Ta (°C)

N

Size (bp)


ClA01

(gt)

R

53

27

198

S/R

53

2

198

S

53

23

-

Rlc

53

15

196


ClA02

(tg)

R

53

27

110-114

S/R

53

2

110-114

S

53

23

112-116

Rlc

53

15

112-116


ClA03

(tg)

R

53

27

192-194

S/R

53

2

192-194

S

53

23

-

Rlc

53

15

190


ClB03

(ag) (ga)

R

53

27

233-239

S/R

53

2

233-239

S

53

23

233-239

Rlc

53

15

239


ClB11

(ca)

R

53

27

311

S/R

53

2

311

S

53

23

311-313

Rlc

53

15

311-313


ClC01

(gt)

R

53

27

175-179

S/R

53

2

175-179

S

53

23

173-175

Rlc

53

15

173-175


ClC08

(ct) (ct)

R

55

27

216-220

S/R

55

2

216-220

S

55

23

260-306-(316)

Rlc

55

15

306


ClC12

(ac)

R

53

27

226

S/R

53

2

226

S

53

23

226-228

Rlc

53

15

230


ClD06

(gcgt)

R

53

27

199-207

S/R

53

2

199-207

S

53

23

237

Rlc

53

15

-


ClD12

(gtgc)

R

53

27

274-278

S/R

53

2

274-278

S

53

23

264-274

Rlc

53

15

274


ClE01

(tg)

R

53

27

213

S/R

53

2

213

S

53

23

209

Rlc

53

15

-


Ta = annealing temperature, N = number of individuals genotyped, Size = allele(s) size(s). S/R represents the two individuals with the COI haplotype 2 (like in form S) and the morphotype R. "R", "S" and "Rlc" refer to the three West European morphotypes.

Pigneur et al. BMC Evolutionary Biology 2011 11:147   doi:10.1186/1471-2148-11-147

Open Data