Table 2

Clones representing different GBSSI variants as inferred from phylogenetic analyses

Sequence

GenBank

Inferred origin


Plant 1


Th. intermedium-1a*

GU292399

Taeniatherum

F/K clones (40/8)

Th. intermedium-1b (10)

GU292400

Dasypyrum

Th. intermedium-1c (19)

GU292401

Thinopyrum

Th. intermedium-1d (3)

GU292402

Pseudoroegneria


Plant 2


Th. intermedium-2a*

GU292403

Taeniatherum

F/K clones (26/3)

Th. intermedium-2b (17)

GU292404

Dasypyrum

Th. intermedium-2c (5)

GU292405

Dasypyrum

Th. intermedium-2d (1)

GU292406

Dasypyrum


Plant 3


Th. intermedium-3a*

GU292407

Taeniatherum

F/K clones (34/10)

Th. intermedium-3b (9)

GU292408

Dasypyrum

Th. intermedium-3c (1)

GU292409

Dasypyrum

Th. intermedium-3d (2)

GU292410

Aegilops

Th. intermedium-3e (11)

GU292411

Thinopyrum

Th. intermedium-3f (1)

GU292412

Pseudoroegneria


Plant 4


Th. intermedium-4a*

GU292413

Taeniatherum

F/K clones (32/4)

Th. intermedium-4b (20)

GU292414

Dasypyrum

Th. intermedium-4c (2)

GU292415

Pseudoroegneria

Th. intermedium-4d (6)

GU292416

Aegilops


Sequences representing different GBSSI variants amplified in four Thinopyrum intermedium accessions using the F/M and F/K primers. Sequences marked with an asterisk were amplified with F/M primers and directly sequenced. The numbers of sequenced F/K clones and putative recombinants are provided for each accession. Sequence identifier, GenBank accession number and inferred sequence origin are given. After each sequence identifier, the number of identical clones amplified in each accession is given in parentheses.

Mahelka et al. BMC Evolutionary Biology 2011 11:127   doi:10.1186/1471-2148-11-127

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