Table 5

Comparison of single domain DMTs with EamA

EamA-1

1 × EamA


MDR

97,5%

96,4%

UPF0546

97,3%

85,1%

DUF486

86,0%

64,8%

UPF0060

0,6%

0,2%


Table shows result of pairwise HHsearch comparison of EamA-1, using all sequences in the alignment, or 1 × EamA, i.e. cases where EamA is present in first domain slot without EamA in second domain slot. The EamA HMM is used as query, and the other families as 'database'.

Västermark et al. BMC Evolutionary Biology 2011 11:123   doi:10.1186/1471-2148-11-123

Open Data