Table 2 

Divergence process table of domain evolution from EamA 

Domain halve distance (100p) 
Average distance (100p) from EamA 
Standard deviation of similarity (p) to EamA 



EamA 
0,6% 
0,0% 
0,0 
TPT 
3,1% 
0,7% 
0,7 
DUF914 
2,7% 
1,0% 
0,7 
UAA 
6,9% 
1,3% 
1,0 
NST 
96,6% 
2,4% 
2,0 


Divergence process table showing increasing distance between DMT1 and DMT2, and increasing distance to EamA. The measurements are indicated in HHsearch probability and presented as (100p) to convert similarity to distance. The domain halve distance is reported using DMT1 as HMM query and DMT2 as 'database'. The standard deviation is shown because each measurement in the EamA distance column represents the average of (DMT1 to EamA1; DMT1 to EamA2; DMT2 to EamA1; DMT2 to EamA2). 

VĂ¤stermark et al. BMC Evolutionary Biology 2011 11:123 doi:10.1186/1471214811123 