Table 1

Identified algae MIPs

Organism

Ver.a

Nameb

GI numberc

Gene Modeld

Comment

Chlamydomonas reinhardtii

4.0

CrMIPD1;1

159471952

au5.g4049_t1

Previously CrMIP1

CrMIPD2;1

159466961e

-

Previously CrMIP2

Volvox carteri

1.0

VcMIPD1;1

e_gw1.60.83.1

VcMIPD2;1

-

VcMIPD4;1f

fgenesh4_pg.C_scaffold_32000076

Coccomyxa C-169g

2.0

CcMIPA1;1

-

CcMIPD 1;1

-

CcMIPD3;1

-

CcPIP4;1

-

CcPIP4;2

-

CcGIP1;1

-

Chlorella NC64A

1.0

CnMIPD1;1

IGS.gm_19_00211

CnMIPE1;1

-

CnMIPE1;2

-

CnMIPE1;3

-

Gap after exon 4

CnGIP1;1

-

Gap before ex7

Micromonas pusilla CCMP1545

2.0

MpMIPC1;1

-

Micromonas RCC299

3.0

MrMIPC1;1

EuGene.0900010614

Ostreococcus lucimarinus

2.0

OlMIPB1;1

145352492

estExt_fgenesh1_pg.C_Chr_120034

EST

Ostreococcus RCC809

2.0

OrMIPB1;1

EuGene.1100010007

OrMIPE1;1

estExt_Genewise1Plus.C_chr_30268

EST

Ostreococcus tauri

2.0

OtMIPC1;1f

0400010048

a)Genome version at JGI [14] used for annotation b)Name used for MIP in this paper c)GI number for sequence in GenBank [16] if existing d)Name of gene model for MIP at JGI [14] if existing e)The GI number refer to a gene model with shorter 5'-end f)These two MIPs were found when rechecking the genomes for MIPs and are therefore not included in the phylogenetic analysis presented in this article. Vc_MIPD2_1 does not start with methionine g)Previously classified as Chlorella vulgaris C-169

Anderberg et al. BMC Evolutionary Biology 2011 11:110   doi:10.1186/1471-2148-11-110

Open Data