Table 1

'Red lineage' genes in E. gracilis

Cluster ID

gene product

CR+Red

CR+Green

other

Peranema EST


0505

homogentisate phytyltransferase (HPT)

+

1748

hypothetical protein

+

5429

glucokinase

+

7874

Clp protease proteolytic subunit (ClpP)

+


2407

phosphoribulokinase (PRK)

+

2525

folate-biopterin transporter (FBT)

+


1468

zeaxanthin epoxidase (ZEP)

+

2373

fructose 1,6-diphosphatase (FBP), plastidic

+

2373

FBP, cytosolic

+

4157

6-phosphogluconate dehydrogenase (GND)

+

+

4273

ADP/ATP transporter

+

+

5532

GTP-binding protein LepA

+

6234

methionine adenosyltransferase (MAT)

+

AAQ19605

fatty acid desaturase

+


Original cluster IDs had "EEL0000" followed by the 4-digit numbers shown. The accession number is shown for the fatty acid desaturase gene, which was not found in the EST database.

Maruyama et al. BMC Evolutionary Biology 2011 11:105   doi:10.1186/1471-2148-11-105

Open Data