Table 2

Some estimated parameters of molecular evolution

Exon1

Exon2

Exon3

Exon4

Exon5

Exon6

DomainA

DomainB


κ

1.81901

2.88324

4.85122

1.92371

5.90266

2.18681

1.50398

1.45864


α

233.20*

137.621

0.66662

0.66759

0.70397

3.14532

2.04029

0.70016


r1/r2a

9.34444

1.88055

0.46272

2.23894

1.06430

1.06613

0.43880

2.78380


7.19374

0.83409

0.46463

0.99973

1.78446

1.16327

0.45130

0.92838


r1/r2b

6.65571

0.89836

1.00285

1.01670

0.46319

0.47190

0.55024

2.92695

0.39720

0.42971

0.71267

0.45403

0.59854

0.47959

0.74729

1.02247


r1/r2c

16.75779

2.09060

1.40709

2.23928

0.77386

0.98396

0.73568

2.86161

#

0.45376

0.26278

0.03274

0.11204

0.21409

0.47428

0.74774

0.39388


To obtain stable local clock estimations, only two local clocks were specified in each run (see Figure 2B) and the remaining species had rate r0 = 1. *: a large unstable value. #: r2c was not stable because the clade (mouse, rat) was too close to the root.

He et al. BMC Evolutionary Biology 2011 11:102   doi:10.1186/1471-2148-11-102

Open Data