Table 4

Genetic diversity estimates in the fruitless C3 exon and intron.

Species

N

h

Hd

(SD)

S

Sy

NSy

sg

m3

π

(SD)

πs

(SD)

πa

(SD)

θ

(SD)


A. fraterculus

37

36

0.998

(0.007)

82

42

34

78

4

0.011

(0.0005)

0.027

(0.0021)

0.006

(0.0010)

0.028

(0.009)

Exon

A. obliqua

41

40

0.999

(0.006)

80

41

39

77

3

0.013

(0.0005)

0.026

(0.0020)

0.008

(0.0007)

0.027

(0.008)

A. sororcula

19

19

1.000

(0.017)

62

39

26

60

2

0.014

(0.0005)

0.034

(0.0031)

0.007

(0.0011)

0.025

(0.009)

Anastrepha sp.

97

94

0.999

(0.002)

167

83

78

157

9

0.013

(0.0005)

0.030

(0.0015)

0.007

(0.0004)

0.047

(0.009)


A. fraterculus

37

22

0.922

(0.030)

17

-

-

17

0

0.027

(0.0022)

-

-

0.057

(0.021)

Intron

A. obliqua

41

11

0.429

(0.097)

8

-

-

8

0

0.009

(0.0024)

-

-

0.026

(0.012)

A. sororcula

19

13

0.936

(0.037)

16

-

-

15

1

0.039

(0.0058)

-

-

0.064

(0.026)

Anastrepha sp.

97

38

0.834

(0.032)

28

-

-

22

6

0.026

(0.0022)

-

-

0.077

(0.023)


N = number of sequences; h = number of haplotypes; Hd = haplotype diversity; S = Number of polymorphic sites; Sy = number of synonymous changes; NSy = number of nonsynonymous changes; sg = singletons; m3 = sites with more than three variants; π = nucleotide diversity; πs = synonymous nucleotide diversity; πa = nonsynonymous nucleotide diversity; θ = Waterson's theta. SD = standard deviation.

Sobrinho and de Brito BMC Evolutionary Biology 2010 10:293   doi:10.1186/1471-2148-10-293

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