Table 1

Diversity indices computed for each of the seven genetic loci analyzed.

FSC

FCT

FST

P (FSC)

P (FCT)

P (FST)

Dintra

Dinter

P (Dintra)

P (Dinter)


ABO

Allele Freq

0.007

(0.002)

0.010

(0.010)

0.017

(0.012)

0.331

(0.000)

0.437

(0.000)

0.697

(0.000)

0.007

(0.005)

0.017

(0.017)

0.061

(0.329)

0.128

(0.660)

3.00 ± 0.02

(3.00)

0.475 ± 0.015

(0.48)

MNSs

Allele Freq

0.006

(0.005)

0.004

(0.004)

0.010

(0.009)

0.401

(0.000)

0.231

(0.001)

0.983

(0.000)

0.011

(0.008)

0.011

(0.011)

0.079

(0.205)

0.156

(0.346)

4.00 ± 0.01

(4.00)

0.696 ± 0.005

(0.690)

RH

Allele Freq

0.022

(0.011)

0.047

(0.042)

0.068

(0.052)

0.986

(0.000)

0.997

(0.000)

1.000

(0.000)

0.021

(0.014)

0.066

(0.072)

0.226

(0.473)

0.709

(0.945)

4.79 ± 0.19

(5.56)

0.664 ± 0.009

(0.657)

GM

Allele Freq

0.012

(0.010)

0.039

(0.040)

0.051

(0.049)

0.814

(0.000)

0.989

(0.000)

1.000

(0.000)

0.014

(0.011)

0.051

(0.053)

0.103

(0.292)

0.522

(0.871)

3.97 ± 0.18

(4.97)

0.54 ± 0.019

(0.538)

HLA-DBR1

Allele Freq

0.009

(0.008)

0.002

(0.003)

0.011

(0.010)

0.983

(0.000)

0.135

(0.000)

0.997

(0.000)

0.010

(0.009)

0.011

(0.011)

0.239

(0.396)

0.253

(0.567)

9.79 ± 0.26

(11.86)

0.872 ± < 0.004

(0.872)

Y-STR

STRs

0.085

(0.031)

0.222

(0.192)

0.288

(0.217)

1.000

(0.000)

1.000

(0.000)

1.000

(0.000)

0.110

(0.084)

0.359

(0.299)

0.330

(0.468)

0.963

(1.00)

11.83 ± 0.60

(42.59)

*0.863 ± 0.031

*(0.874)

Y-SNP

SNPs

0.0511

(0.049)

0.470

(0.446)

0.497

(0.473)

0.734

(0.000)

1.000

(0.000)

1.000

(0.000)

0.065

(0.054)

0.723

(0.710)

0.425

(0.308)

0.681

(1.00)

5.334 ± 1.60

(8.30)

*0.592 ± 0.193

*(0.574)

mt-HVS1

DNA seq

0.022

(0.027)

0.022

(0.020)

0.044

(0.047)

0.988

(0.000)

0.963

(0.000)

1.000

(0.000)

0.021

(0.025)

0.043

(0.045)

0.203

(0.386)

0.553

(0.844)

19.03 ± 4.45

(32.96)

*0.92 ± 0.070

*(0.938)


The first line represents the mean value for 10,000 resamplings while the second line (in brackets) represents the statistics computed using the whole dataset. P(x) represents the proportion of indices statistically significant at 1% level or the exact P value for the whole dataset. D stands for Reynolds genetic distances, for the average number of alleles over the samples and for the average heterozygosity (*gene diversity) over the samples

Currat et al. BMC Evolutionary Biology 2010 10:237   doi:10.1186/1471-2148-10-237

Open Data