Amino acid alignment of tachylectin-2 alleles from Oculina varicosa. Values in parentheses are the number of times that an allele was found in a geographic survey of variation; populations where each allele was found are in Table 4. Four boxed residues are under positive selection based on Bayesian posterior probabilities of ≥ 90% using model M8 based on two alternative allele trees. Additional variable positions are under positive selection based on BEB posterior probabilities of ≥50% using the best ML tree (residues 10, 11, 13, 14, 21, 48 and 71) and a collapsed NJ tree (residue 27).
Hayes et al. BMC Evolutionary Biology 2010 10:150 doi:10.1186/1471-2148-10-150