Table 3

Overrepresented motifs found in three functional groups and in the top10 DEGs of worker L4.

Functional groups

Motif_name

Motif_consensus

MAP

Church

ROC_AUC

MNCP


Apoptosis and ovary dev.(4)

Other proteins (4.2)**

M4-2

TwTG.GAAAAkwr.AkA

7.89

5.32e-10

0.90

147.42


JH responsive (6)

Protein binding (6.3)**

M6-3-1

yCwcgcwt..Gy..Gww.GA

11.22

8.48e-13

0.91

180.52

M6-3-2

kSGtGmaw.....GMr..am

12.20

5.32e-10

0.91

216.45

M6-3-3

C.wCG.aCGA..m.Kw.kA

7.80

5.59e-10

0.74

243.93


Hormone + caste(7)**

M7

KAtwCr..k.g.w....CG.Gm

11.46

1.72e-10

0.79

92.14


Top10 DEG L4 Worker*

WL4-1

gwms.aGmsG......CGs.g

45.87

9.32e-13

0.74

36.53

WL4-2

cwsAsw.GCGYry

9.39

1.72e-10

0.78

74.80

WL4-3

G.SG....m.CRr.g.....s..wg

15.11

1.72e-10

0.74

97.93


* P < 0.05; ** P < 0.01 for the four metrics.

Barchuk et al. BMC Developmental Biology 2007 7:70   doi:10.1186/1471-213X-7-70

Open Data