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Recognition of disease in sentences; without the most frequent diseases. This table shows the total number of diseases in the benchmark (Benchmark), the number of distinct diseases (Diseases), the number of diseases annotated by the method and the number of unique diseases identified. Then we present the result on standard measures like precision and recall. |
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| Benchmark |
Diseases |
Annotated |
Diseases |
FP |
TP |
Recall |
Precision |
F-measure |
|
|
|
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| D look-up |
586 |
269 |
542 |
217 |
143 |
399 |
68.09 |
73.62 |
70.74 |
| Statistical |
586 |
269 |
760 |
299 |
313 |
447 |
76.28 |
58.82 |
66.42 |
| MetaMap |
586 |
269 |
413 |
182 |
95 |
318 |
54.27 |
77.00 |
63.66 |
| Vote 1 |
586 |
269 |
908 |
347 |
398 |
510 |
87.03 |
56.17 |
68.27 |
| Vote 2 |
586 |
269 |
532 |
218 |
123 |
409 |
69.80 |
76.88 |
73.17 |
| Vote 3 |
586 |
269 |
278 |
130 |
30 |
248 |
42.32 |
89.21 |
57.41 |
Jimeno et al. BMC Bioinformatics 2008 9(Suppl 3):S3 doi:10.1186/1471-2105-9-S3-S3 |
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