Table 3

Performance comparison of standard PSSM and smoothed PSSM.

Data set

Smoothed PSSM

Standard PSSM



Acc (%)

MCC

Acc (%)

MCC


RBP86

87.99 (87.65)

0.68 (0.67)

83.39 (83.35)

0.502 (0.496)

RBP109

89.70 (89.36)

0.58 (0.56)

87.38 (86.95)

0.45 (0.43)

RBP107

80.44 (79.84)

0.42 (0.40)

77.80 (77.55)

0.36 (0.35)


ยง The performance of incorporating a three-way data split procedure is shown in the parentheses.

Cheng et al. BMC Bioinformatics 2008 9(Suppl 12):S6   doi:10.1186/1471-2105-9-S12-S6

Open Data