BMC Bioinformatics

official impact factor 3.03

Open Access Research article

Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities

Usman Roshan1*, Satish Chikkagoudar1 and Dennis R Livesay2

Author Affiliations

1 Department of Computer Science, New Jersey Institute of Technology, Newark, NJ, USA

2 Department of Computer Science and Bioinformatics Research Center, University of North Caroline at Charlotte, Charlotte, NC, USA

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BMC Bioinformatics 2008, 9:61 doi:10.1186/1471-2105-9-61

Published: 28 January 2008

Additional files

Additional file 1:

Supplementary material. Characteristics of RNA families used in this study, detailed description of Probalign, and command line parameters of programs used.

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