Table 2

Thirteen genes on PDGene Top Results list: ranks and rank percentiles generated by querying Gene Prospector and SNPs3D on 06/26/2008.

Gene Prospector

SNPs3D


Rank Position

Rank Percentile

Rank Position

Rank Percentile


GBA

33

15.3

105

74.5

LRRK2

1

0.4

NA

NA

SNCA

5

2.3

3

2.1

MAPT/STH

2

0.9

28

20.0

PINK1

11

5.1

23

16.3

CYP2D6

7

3.2

NA

NA

APOE

3

1.4

6

4.3

MAOB

13

6.0

25

17.7

ELAVL4

123

57.2

NA

NA

UCHL1

8

2.3

22

15.6

DRD2

25

11.6

104

73.8

GSTM1

43

20.0

133

94.3

SEMA5A

14

6.5

NA

NA


Note: two top genes (GWA 2q36.3 and GWA 7p14.2) were excluded.

NA: Does not exist in the list.

Total number of genes from Gene Prospector: 215

Total number of genes from SNPs3D: 141

Yu et al. BMC Bioinformatics 2008 9:528   doi:10.1186/1471-2105-9-528

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