Table 1

Overview of the evaluated feature detection algorithms

Algorithm

Framework

Version

Programming Language

Availability


centroidPicker

MZmine

0.60

Java

http://mzmine.sourceforge.net/ webcite


centWave matchedFilter

XCMS

1.12.1

C, R

http://bioconductor.org/packages/release/bioc/html/xcms.html webcite


Overview of the compared feature detection algorithms for metabolomics data. MZmine has three feature detection algorithms implemented, but only the centroidPicker is suitable for centroided data and therefore was used for the evaluation.

Tautenhahn et al. BMC Bioinformatics 2008 9:504   doi:10.1186/1471-2105-9-504

Open Data