BMC Bioinformatics

official impact factor 3.03

Open Access Methodology article

caBIG™ VISDA: Modeling, visualization, and discovery for cluster analysis of genomic data

Yitan Zhu1, Huai Li1,2, David J Miller3, Zuyi Wang1,4, Jianhua Xuan1, Robert Clarke5, Eric P Hoffman4 and Yue Wang1*

Author Affiliations

1 Department of Electrical and Computer Engineering, Virginia Polytechnic and State University, Arlington, VA 22203, USA

2 Bioinformatics Unit, RRB, National Institute on Aging, NIH, Baltimore, MD 21224, USA

3 Department of Electrical Engineering, The Pennsylvania State University, University Park, PA 16802, USA

4 Research Center for Genetic Medicine, Children's National Medical Center, Washington, DC 20010, USA

5 Department of Oncology, Physiology & Biophysics and Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC 20007, USA

For all author emails, please log on.

BMC Bioinformatics 2008, 9:383 doi:10.1186/1471-2105-9-383

Published: 18 September 2008

Additional files

Additional file 1:

caBIG™ VISDA: modeling, visualization, and discovery for cluster analysis of genomic data (supplement). The supplement includes derivations and details of the algorithm, more discussions, and introduction of the datasets used in the experiments.

Format: PDF Size: 209KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data