Open Access Highly Accessed Research article

Identification and correction of abnormal, incomplete and mispredicted proteins in public databases

Alinda Nagy, Hédi Hegyi, Krisztina Farkas, Hedvig Tordai, Evelin Kozma, László Bányai and László Patthy*

Author Affiliations

Institute of Enzymology, Biological Research Center, Hungarian Academy of Sciences, H-1113 Budapest, Hungary

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BMC Bioinformatics 2008, 9:353  doi:10.1186/1471-2105-9-353

Published: 27 August 2008

Additional files

Additional file 1:

Comments on entries identified by MisPred routines as suspicious and detailed description of Conflict 4. The file describes detailed analyses and comments of the entries identified as suspicious by the different MisPred routines, and contains the detailed description of the procedure of the identification of suspicious sequences by Conflict 4.

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Additional file 2:

List of erroneous Swiss-Prot sequences identified by MisPred. The file contains the list of erroneous Swiss-Prot sequences identified by MisPred.

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Open Data

Additional file 3:

List of extracellular Pfam-A domain families. The file contains the list of extracellular Pfam-A domain families.

Format: PDF Size: 114KB Download file

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Additional file 4:

List of intracellular Pfam-A signaling domain families. The file contains the list of intracellular Pfam-A signaling domain families.

Format: PDF Size: 102KB Download file

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Additional file 5:

List of nuclear Pfam-A domain families. The file contains the list of nuclear Pfam-A domain families.

Format: PDF Size: 104KB Download file

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Additional file 6:

List of Pfam-A domain families suitable for the study of domain integrity. The file contains the list of Pfam-A domain families suitable for the study of domain integrity.

Format: PDF Size: 173KB Download file

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Open Data