Table 2

Rank correlation of semantic similarity with sequence similarity

TO

NTO

Resnik

ResnikMax

Lin

LinMax

Jiang

JiangMax

Kappa

Cosine

Wt.cosine


0.125

0.112

0.086

0.110

0.088

0.104

0.078

0.10

0.106

0.113

0.114


Rank correlation values were calculated for the semantic similarity scores and the sequence similarity bit scores for each gene pair.

Mistry and Pavlidis BMC Bioinformatics 2008 9:327   doi:10.1186/1471-2105-9-327

Open Data