Table 1

Correlation of TO scores with various other similarity measures

Pearson

Spearman


Resnik

0.56

0.77

ResnikMax

0.77

0.87

Lin

0.47

0.74

LinMax

0.64

0.83

Jiang

0.36

0.65

JiangMax

0.58

0.78

NTO

0.65

0.82

Kappa

0.76

0.89

Cosine

0.75

0.82

Weighted Cosine

0.51

0.90


Pearson and rank correlation values were calculated for the scores generated by TO versus each of the seven other measures for the final dataset R100 K, containing 100,000 random gene pairs.

Mistry and Pavlidis BMC Bioinformatics 2008 9:327   doi:10.1186/1471-2105-9-327

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