BMC Bioinformatics

official impact factor 3.03

Open Access Software

Scipio: Using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species

Oliver Keller1, Florian Odronitz2, Mario Stanke3, Martin Kollmar2* and Stephan Waack1*

Author Affiliations

1 Universität Göttingen, Institut für Informatik, Lotzestr. 16-18, 37083 Göttingen, Germany

2 Max-Planck-Institut für Biophysikalische Chemie, Abteilung NMR-basierte Strukturbiologie, Am Fassberg 11, 37077 Göttingen, Germany

3 Universität Göttingen, Institut für Mikrobiologie und Genetik, Abteilung Bioinformatik, Goldschmidtstr. 1, 37077 Göttingen, Germany

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BMC Bioinformatics 2008, 9:278 doi:10.1186/1471-2105-9-278

Published: 13 June 2008

Additional files

Additional file 1:

Source code of the software, two Scipio output conversion tools, and a manual on the usage of the Scipio script.

Format: ZIP Size: 33KB Download file

Open Data