Table 2

Direct experimental support for the interactions uncovered
Interacting genes (locus name)
 Our Method
 PathwayAssist
 Chen's method
 Ref.
HTA2(YBL003C) – HTA1(YDR225W)
 O
 O
 O
 1
HTA2(YBL003C) – HHT2(YNL031C)
 O
 O
 O
 1
HTA2(YBL003C) – HTB2(YBL002W)
 O
 O
 O
 1
HTA2(YBL003C) – HHT1(YBR010W)
 O
 O
 O
 1
HTA2(YBL003C) – HHF1(YBR009C)
 O
 ×
 ×
 1
HTA2(YBL003C) – HHF2(YNL030W)
 O
 ×
 ×
 1
HTA2(YBL003C) – HTB1(YDR224C)
 O
 ×
 ×
 1
HTB2(YBL002W) – HTA1(YDR225W)
 O
 ×
 ×
 1
HTB2(YBL002W) – HHT2(YNL031C)
 O
 ×
 ×
 1
HTB2(YBL002W) – HHT1(YBR010W)
 O
 ×
 ×
 1
HTB2(YBL002W) – HHF1(YBR009C)
 O
 O
 O
 1
HTB2(YBL002W) – HHF2(YNL030W)
 O
 ×
 ×
 1
HTB2(YBL002W) – HTB1(YDR224C)
 O
 O
 O
 N.A.
HHT2(YNL031C) – HTA1(YDR225W)
 O
 ×
 O
 N.A.
HHT2(YNL031C) – HHT1(YBR010W)
 O
 ×
 ×
 1
HHT2(YNL031C) – HHF1(YBR009C)
 O
 ×
 ×
 2
HHT2(YNL031C) – HHF2(YNL030W)
 O
 O
 O
 1
HHT2(YNL031C) – HTB1(YDR224C)
 O
 ×
 ×
 1
HHF1(YBR009C) – HTA1(YDR225W)
 O
 ×
 ×
 1
HHF1(YBR009C) – HHT1(YBR010W)
 O
 O
 O
 1
HHF1(YBR009C) – HHF2(YNL030W)
 O
 O
 O
 4
HHF1(YBR009C) – HTB1(YDR224C)
 O
 ×
 ×
 1
HHF2(YNL030W) – HTA1(YDR225W)
 O
 O
 O
 1
HHF2(YNL030W) – HHT1(YBR010W)
 O
 O
 O
 1
HHF2(YNL030W) – HTB1(YDR224C)
 O
 ×
 O
 N.A.
HTA1(YDR225W) – HHT1(YBR010W)
 O
 ×
 ×
 1
HTA1(YDR225W) – HTB1(YDR224C)
 O
 O
 O
 2,3
HHT1(YBR010W) – HTB1(YDR224C)
 O
 ×
 ×
 1

Kim et al. BMC Bioinformatics 2008 9:225   doi:10.1186/1471-2105-9-225