Table 2

Direct experimental support for the interactions uncovered

Interacting genes (locus name)

Our Method

PathwayAssist

Chen's method

Ref.

HTA2(YBL003C) – HTA1(YDR225W)

O

O

O

1

HTA2(YBL003C) – HHT2(YNL031C)

O

O

O

1

HTA2(YBL003C) – HTB2(YBL002W)

O

O

O

1

HTA2(YBL003C) – HHT1(YBR010W)

O

O

O

1

HTA2(YBL003C) – HHF1(YBR009C)

O

×

×

1

HTA2(YBL003C) – HHF2(YNL030W)

O

×

×

1

HTA2(YBL003C) – HTB1(YDR224C)

O

×

×

1

HTB2(YBL002W) – HTA1(YDR225W)

O

×

×

1

HTB2(YBL002W) – HHT2(YNL031C)

O

×

×

1

HTB2(YBL002W) – HHT1(YBR010W)

O

×

×

1

HTB2(YBL002W) – HHF1(YBR009C)

O

O

O

1

HTB2(YBL002W) – HHF2(YNL030W)

O

×

×

1

HTB2(YBL002W) – HTB1(YDR224C)

O

O

O

N.A.

HHT2(YNL031C) – HTA1(YDR225W)

O

×

O

N.A.

HHT2(YNL031C) – HHT1(YBR010W)

O

×

×

1

HHT2(YNL031C) – HHF1(YBR009C)

O

×

×

2

HHT2(YNL031C) – HHF2(YNL030W)

O

O

O

1

HHT2(YNL031C) – HTB1(YDR224C)

O

×

×

1

HHF1(YBR009C) – HTA1(YDR225W)

O

×

×

1

HHF1(YBR009C) – HHT1(YBR010W)

O

O

O

1

HHF1(YBR009C) – HHF2(YNL030W)

O

O

O

4

HHF1(YBR009C) – HTB1(YDR224C)

O

×

×

1

HHF2(YNL030W) – HTA1(YDR225W)

O

O

O

1

HHF2(YNL030W) – HHT1(YBR010W)

O

O

O

1

HHF2(YNL030W) – HTB1(YDR224C)

O

×

O

N.A.

HTA1(YDR225W) – HHT1(YBR010W)

O

×

×

1

HTA1(YDR225W) – HTB1(YDR224C)

O

O

O

2,3

HHT1(YBR010W) – HTB1(YDR224C)

O

×

×

1

Kim et al. BMC Bioinformatics 2008 9:225   doi:10.1186/1471-2105-9-225