Table 9

Annotations of biological process ontology for biclusters identified by the proposed algorithm for additive models at p-value < 0.001.

Bicluster index

Annotation

P-value

Corrected P-value

Genes

1

chromatin modification

3.84E-04

1.39E-01

YBR081C, YBR198C, YDR392W, YDR448W, YGL112C, YMR236W, YNL097C

histone acetylation

4.84E-04

1.76E-01

YBR081C, YBR198C, YDR392W, YDR448W, YFL039C, YGL112C, YJL081C, YMR236W, YNL136W

endocytosis

7.24E-04

2.63E-01

YBR109C, YCL034W, YDR388W, YDR490C, YER166W, YFL039C, YGL106W, YHR001W, YHR073W, YNL084C, YNL227C, YNL243W, YOR089C, YOR109W, YOR327C, YPL145C

2

aerobic respiration

2.47E-04

4.34E-02

YBR026C, YDL174C, YDR231C, YHR001W, YMR030W, YMR081C, YPL132W, YPL159C

3

ribosome biogenesis and assembly

2.75E-13

4.73E-11

YBL024W, YBR142W, YDL153C, YDL167C, YDR060W, YDR120C, YDR312W, YDR365C, YEL026W, YER082C, YGL099W, YGR162W, YGR245C, YJL033W, YJR002W, YJR066W, YLL008W, YLR175W, YLR401C, YNL110C, YNL132W, YNL175C, YOL077C, YOR145C, YOR272W, YPL126W

35S primary transcript processing

2.23E-06

3.84E-04

YCL031C, YDR339C, YER082C, YGR090W, YJL033W, YJR002W, YLL008W, YLR175W, YOR145C, YPR137W

4

ergosterol biosynthetic process

1.08E-04

1.33E-02

YLR450W, YML008C, YMR202W, YMR208W

translational elongation

1.87E-06

2.30E-04

YAL003W, YDL081C, YDR382W, YDR385W, YLR249W, YLR340W, YOL039W

regulation of translational fidelity

7.04E-07

8.67E-05

YBR048W, YDL229W, YDR025W, YGR118W, YNL209W, YPL081W

ribosomal small subunit assembly and maintenance

6.90E-05

8.49E-03

YBR048W, YDR025W, YDR447C, YGR214W, YLR048W, YLR167W

ribosomal large subunit assembly and maintenance

6.83E-06

8.40E-04

YBR142W, YDR312W, YLR075W, YLR340W, YLR448W, YML073C, YOL127W, YPR102C

translation

6.92E-44

8.51E-42

YBL072C, YBL092W, YBR048W, YBR268W, YDL061C, YDL075W, YDL081C, YDL082W, YDL083C, YDL136W, YDL191W, YDL229W, YDR012W, YDR025W, YDR064W, YDR382W, YDR447C, YDR450W, YDR471W, YDR500C, YER074W, YER117W, YER131W, YGR118W, YGR214W, YHL001W, YHR141C, YIL069C, YJL136C, YJL190C, YJR123W, YKL056C, YKL156W, YKR057W, YKR094C, YLR048W, YLR075W, YLR167W, YLR185W, YLR325C, YLR340W, YLR388W, YLR441C, YLR448W, YML026C, YML063W, YML073C, YMR143W, YMR242C, YNL067W, YNL096C, YNL162W, YNL209W, YNL301C, YNL302C, YNL306W, YOL039W, YOL040C, YOL127W, YOR167C, YOR234C, YOR293W, YOR312C, YOR369C, YPL081W, YPL090C, YPL143W, YPL198W, YPR102C

6

protein folding

3.15E-04

1.51E-02

YDR214W, YFL016C, YML130C, YNL007C, YOR027W

copper ion import

3.98E-04

1.91E-02

YLR411W, YPR124W

8

tricarboxylic acid cycle

8.65E-04

1.03E-01

YDR178W, YIL125W, YLL041C, YNL037C

mitochondrial electron transport, ubiquinol to cytochrome c

4.23E-04

5.04E-02

YEL024W, YHR001W, YOR065W

ubiquitin-dependent protein catabolic process

3.41E-04

4.05E-02

YBR173C, YDR394W, YJL001W, YMR119W, YOL038W

9

cytokinesis, contractile ring contraction

1.51E-04

3.17E-03

YBR038W, YHR023W

10

cell morphogenesis checkpoint

8.19E-04

7.37E-02

YJL187C, YKL101W

chitin biosynthetic process

8.19E-04

7.37E-02

YER096W, YNL233W

mitotic sister chromatid cohesion

6.67E-06

6.01E-04

YFL008W, YIL026C, YJL019W, YMR076C, YMR078C, YNL273W

14

glycolysis

4.18E-04

3.81E-02

YCL040W, YDR050C, YJR009C, YKL152C

ribosomal small subunit assembly and maintenance

9.27E-04

8.43E-02

YDR337W, YGR214W, YLR167W, YML024W

15

protein folding

4.54E-04

1.22E-02

YAL005C, YBR169C, YDR214W, YLR216C

19

tricarboxylic acid cycle

7.49E-05

2.55E-03

YDR148C, YLL041C, YNR001C

24

response to stress

3.45E-04

3.45E-03

YBR072W, YDR258C, YPL240C

25

SRP-dependent cotranslational protein targeting to membrane, translocation

4.27E-04

8.12E-03

YAL005C, YER103W

response to stress

6.85E-05

1.30E-03

YAL005C, YDR258C, YER103W, YPL240C

protein folding

5.73E-04

1.09E-02

YAL005C, YDR258C, YER103W

protein refolding

2.86E-04

5.43E-03

YAL005C, YPL240C

Cheng et al. BMC Bioinformatics 2008 9:210   doi:10.1186/1471-2105-9-210