|
Global statistics of genomic sequences in Leishmania infantum. |
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| Genomic Poly(A) |
Random Genomic |
|||||||||
| A |
T |
C |
G |
YY |
A |
T |
C |
G |
YY |
|
|
|
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| Average |
20.3 |
25.6 |
34.1 |
29.3 |
29.1 |
20.1 |
20.2 |
29.7 |
30.0 |
24.1 |
| Median |
20.8 |
25.7 |
34.0 |
28.6 |
29.6 |
20.0 |
20.4 |
29.7 |
30.0 |
24.2 |
| Standard Deviation |
3.8 |
2.7 |
2.6 |
2.8 |
4.0 |
1.0 |
1.0 |
1.0 |
1.0 |
1.1 |
|
Values are derived from 218 sequences of 1601 nucleotides and represent the canonical DNA bases in addition to pyrimidine dinucleotides (YY). The genomic poly(A) sequences encompass 800 nucleotides surrounding the mapped poly(A) site. As a control, 218 genomic regions were selected at random via an ad-hoc JAVA script. | ||||||||||
Smith et al. BMC Bioinformatics 2008 9:158 doi:10.1186/1471-2105-9-158 |
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