Table 1

'Phenocluster' with 17 associated genes with a GO-score of 0.9 in the Biological Process subtree.

Entrez ID

Gene Symbol

Gene name

# annotated GO-process terms

# terms common to at least 50% genes in group

# terms common to at least 75% genes in group


172805

rps-19

Ribosomal Protein, Small subunit 19

5

5

5

174346

eif-3.G

Eukaryotic Initiation Factor

7

4

4

175501

rpl-3

Ribosomal Protein, Large subunit 3

6

6

5

175538

lrs-1

Leucyl tRNA Synthetase

14

6

5

175584

rps-19

Ribosomal Protein, Small subunit 1

7

6

5

175659

rrt1

aRginyl aa-tRNA syntheTase

8

4

4

175796

rpl-23

Ribosomal Protein, Large subunit 23

8

6

5

175901

rps-13

Ribosomal Protein, Small subunit 13

5

5

5

176007

rpl-36

Ribosomal Protein, Large subunit 36

6

6

5

176011

rps-21

Ribosomal Protein, Small subunit 21

6

6

5

176024

prs-1

Prolyl tRNA Synthetase

9

6

5

176071

rpl-9

Ribosomal Protein, Large subunit 9

7

6

5

176097

rpl-35

Ribosomal Protein, Large subunit 35

5

5

5

176146

rpl-21

Ribosomal Protein, Large subunit 21

5

5

5

177583

rps-21

Ribosomal Protein, Small subunit 2

5

5

5

179063

W02F12.5

W02F12.5

8

5

5

189611

Y37B11A.3

Y37B11A.3

2

1

1


Of all terms associated with this group, there are 5 terms annotated to 14 out of 17 genes. Due to the homogeneous nature of the annotations, one can hypothesize that the remaining 3 genes should receive the same common annotation as the other 14 genes.

Groth et al. BMC Bioinformatics 2008 9:136   doi:10.1186/1471-2105-9-136

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