Table 3

Level-4 GO terms annotated to at least 30 proteins in at least two genomes with the top five average FL2 scores for each category of the Gene Ontology

GO term

Avg. FL2 score


Biological process

Cellular biosynthesis

1.2381

Regulation of kinase activity

1.2159

Regulation of biosynthesis

1.1546

Cellular macromolecule metabolism

1.1407

Response to pest, pathogen, or parasite

1.1367

Molecular function

Phosphotransferase activity, alcohol group as acceptor

1.1758

Transcription factor activity

1.1672

Kinase activity

1.1640

Transcription cofactor activity

1.1639

Calcium ion binding

1.1312

Cellular component

Eukaryotic 48S initiation complex

1.6388

Eukaryotic 43S preinitiation complex

1.4247

Cytosol

1.2630

Intrinsic to plasma membrane

1.1625

Intracellular non-membrane-bound organelle

1.1393


Chua et al. BMC Bioinformatics 2007 8(Suppl 4):S8   doi:10.1186/1471-2105-8-S4-S8

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