An efficient grid layout algorithm for biological networks utilizing various biological attributes
- Equal contributors
Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan
BMC Bioinformatics 2007, 8:76 doi:10.1186/1471-2105-8-76Published: 6 March 2007
Additional file 1:
Resulting layouts of applying LK-grid layout algorithm, CB-grid layout algorithm and SCCB-grid layout algorithm to Fas-induced apoptosis pathway model and ASE cell fate simulation model are shown. Comparison of these results are also included.
Format: PDF Size: 3.1MB Download file
This file can be viewed with: Adobe Acrobat Reader
Additional file 2:
Biopathway model files. Endothelial cell model, Fas-induced apoptosis pathway model and ASE cell fate simulation model are included.
Format: ZIP Size: 76KB Download file