Table 4

Proportion of good quality MACS and mean norMD


MACS
init
mm
sdm
sm
rm



Good quality MACS (%)
79
83
77
95
75

subset-100 (91 seq.)
norMD ≥ 0.3 (%)
95
100
98
99
99

mean norMD*
0.78
0.93
0.95
0.86
0.96

Standard deviation*
0.42
0.34
0.51
0.41
0.38
subset100–500 (114 seq.)
norMD ≥ 0.3 (%)
68
92
83
96
82

mean norMD*
0.51
0.56
0.55
0.63
0.60

Standard deviation*
0.20
0.20
0.17
0.20
0.30
subset+500 (79 seq.)
norMD ≥ 0.3 (%)
78
49
43
89
37

mean norMD*
0.49
0.46
0.45
0.53
0.47

Standard deviation*
0.16
0.11
0.10
0.10
0.17

* considering only good quality MACS

Friedrich et al. BMC Bioinformatics 2007 8:62   doi:10.1186/1471-2105-8-62