Table 2

Sequence coverage between the sampling methods. The method in the first column is considered as the reference




2nd method


1st method (reference)
specific
mm-sm-sdm-rm
mm
sdm
sm
rm
3rd method

mm (28061)
3383 (12%)
1938 (7%)

4783 (17%)


sm




3230 (12%)
885 (3%)

rm




10076 (36%)
2436 (9%)
1118 (4%)
-

sdm (26676)
4120 (15%)
1938 (7%)
4783 (18%)



sm



3230 (12%)

261 (1%)

rm



10076 (38%)

614 (2%)
1734 (7%)
-

sm (12108)
833 (7%)
1938 (16%)
4783 (40%)



sdm



885 (7%)
261 (2%)


rm



2436 (20%)
614 (5%)

362 (3%)
-

rm (45992)
36464 (79%)
1938 (4%)
885 (2%)



sm



3230 (7%)

261 (1%)

sdm



1118 (2%)
1734 (4%)
362 (1%)

-

Friedrich et al. BMC Bioinformatics 2007 8:62   doi:10.1186/1471-2105-8-62